BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B03SP1|AL429998
(925 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1275 1730 0.0
>3x_Contig1275
Length = 5476
Score = 1730 bits (872), Expect = 0.0
Identities = 911/918 (99%), Gaps = 5/918 (0%)
Strand = Plus / Plus
Query: 1 gatcctgcatccgacgtaacacaaaacccaacgtgttcccagcaagttgaacaccccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4001 gatcctgcatccgacgtaacacaaaacccaacgtgttcccagcaagttgaacaccccttt 4060
Query: 61 gatcatgaactaaacgccgaaaatatgaaagggacagttgaggaagcatcagaagatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4061 gatcatgaactaaacgccgaaaatatgaaagggacagttgaggaagcatcagaagatttt 4120
Query: 121 caaacctacaatgtgagtgctgaaagtccttcagatgacatttttcatgatgcccttgac 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4121 caaacctacaatgtgagttctgaaagtccttcagatgacatttttcatgatgcccttgac 4180
Query: 181 attaagcatagctttcctatttctagtgatttcttcgcgtctaagaatgtccaagtctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 attaagcatagctttcctatttctagtgatttcttcgcgtctaagaatgtccaagtctct 4240
Query: 241 ccggaaaagaaagctggacatagtagtatgactatcgatcattcaataaatgaaaataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 ccggaaaagaaagctggacatagtagtatgactatcgatcattcaataaatgaaaataaa 4300
Query: 301 ccaaatattccgttgttcatcgataaggaaacgattcgcttaactactagtcccgtacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4301 ccaaatattccgttgttcatcgataaggaaacgattcgcttaactactagtcccgtacga 4360
Query: 361 gttaaccaatctgagaaagtttcaggcgatgcttctatcaaaaatagtagaagaagaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4361 gttaaccaatctgagaaagtttcaggcgatgcttctatcaaaaatagtagaagaagaaaa 4420
Query: 421 ctggaaaacaatttgaactccacactcttccaaaagccttctcagcatcataacattccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4421 ctggaaaacaatttgaactccacactcttccaaaagccttctcagcatcataacattccg 4480
Query: 481 ttattcaacctgaactctagtcagacaacaactaataacctgccgaacaattcagacggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4481 ttattcaacctgaactctagtcagacaacaactaataacctgccgaacaattcagacggt 4540
Query: 541 accgactctcacgagaaagctggatcaacgtctcacgtaacttatcctaaaccattggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4541 accgactctcacgagaaagctggatcaacgtctcacgtaacttatcctaaaccattggag 4600
Query: 601 ccctcaaaggcaatttcagatcatgatttgtcaaattctagccgtgaacatgagtcggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4601 ccctcaaaggcaatttcagatcatgatttgtcaaattctagccgtgaacatgagtcggaa 4660
Query: 661 ctactggcatccgaagcgcttcctgatgataaacctgtaataagaattccactccttgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4661 ctactggcatccgaagcgcttcctgatgataaacctgtaataagaattccactccttgtt 4720
Query: 721 caccgcacggaggtacatgaagctgcatctcccttcgaagatactgcacaagccaagaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4721 caccgcacggaggtacatgaagctgcatctcccttcgaagatactgcacaagccaagaga 4780
Query: 781 tctactgaattgagtgagtacgtagaatccttaatggaggatccgacgcaagaggaatta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4781 tctactgaattgagtgagtacgtagaatccttaatggaggatccgacgcaagaggaatta 4840
Query: 841 gccgagcctattgtaatggaa-cagctgacatgcgggta-scgttcgca-cacaag-tac 896
||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| |||
Sbjct: 4841 gccgagcctattgtaatggaaccagctgacatgcgggtacgcgttcgcaccacaagttac 4900
Query: 897 atcg-aatagaagaaata 913
|||| |||||||||||||
Sbjct: 4901 atcgaaatagaagaaata 4918
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6321
Number of Sequences: 1807
Number of extensions: 6321
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 925
length of database: 10,358,551
effective HSP length: 16
effective length of query: 909
effective length of database: 10,329,639
effective search space: 9389641851
effective search space used: 9389641851
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)